Why do I get a MySQL error when running EPM repeatedly?
Each time you execute EPM, it starts a MySQL server process in order to store and report results.
It takes a few hundreths of a second to close open files and stop the server process, and therefore you should pause a moment before re-running MySQL. In normal operation you would not see this error, only when testing the tool manually from the command line.
This problem is also resolved by running a stand-alone MySQL server and pointing EPM to it using the "-s" parameter.